init

OpenSource.md

+---
+title: Open Source
+visibility: public
+aliases:
+  - Open Software
+  - FOSS
+related:
+  - "[[OSPO]]"
+  - "[[openscience|Open Science]]"
+---
+See also: [[openscience|Open Science]] | [[OSPO]]
+
+## Motivation
+
+- [presentation HPC Collab. Source & Standards, B. Lelbach (NVIDIA)](https://indico.cern.ch/event/1327562/contributions/5614154/attachments/2760998/4808099/hpc_collaborative_source_and_standards_at_nvidia__r0.pdf)
+    - users
+        - Allow modification to suit their needs.
+        - Facilitate collaboration and innovation.
+        - Ensure portability.
+        - Guarantee long-term support.
+        - Enable result reproduction
+    - developers
+        - Greater adoption of our products.
+        - Insight into how our product is used.
+        - Insight into who uses our product.
+        - Enable result reproduction.
+        - *My amendment: community contributions* (speaker on q from audience: at least in their case not too many contributions and requires work to incorporate PRs)
+
+
+## Software
+
+- [Free Software Directory @FSF](https://directory.fsf.org/wiki/Main_Page)
+- [gnu.org](https://www.gnu.org/)
+- <https://www.fossology.org/>: FOSSology is a open source license compliance software system and toolkit ^1a1526
+- [Research Software Alliance: Guidelines](https://www.researchsoft.org/guidelines/)
+- [[OSPO|Open Source Program Offices]]
+- [OW2 IT infrastructure](https://www.ow2.org/view/IT_Infrastructure/): RocketChat, GitLab, SonarQube, Collabora
+
+```dataview
+TABLE WITHOUT ID
+file.link AS "Name",
+url AS "Website",
+category AS "Category"
+WHERE type = "software" AND (contains(license,"opensource") OR contains(license,"open-source"))
+```
+<!--
+GROUP BY category
+broken because category now array?
+-->
+
+
+### Contributing
+
+- [Article First Open Source Contribution][first-os-contrib]
+
+
+## Hardware
+
+- Open Source Hardware Association (OSHWA)
+- [libreplanet.org: F/Right to Repair](https://libreplanet.org/wiki/Group:FSF/Fight-to-Repair): organisations, resources, successes
+
+
+## Organisations
+
+Tags: #check/opensource
+
+- [Free Software Foundation (FSF)](https://www.fsf.org)
+    - [Protest Against DRM](https://www.fsf.org/news/worldwide-community-of-activists-protest-overdrive-and-others-forcing-drm-upon-libraries): [https://defectivebydesign.org](https://defectivebydesign.org/) #tech/drm
+- [LibrePlanet](https://libreplanet.org)
+- [CHAOSS](https://chaoss.community/): Community Health Analytics in Open Source Software
+  CHAOSS is a Linux Foundation project focused on creating metrics, metrics models, and software to better understand open source community health on a global scale.
+- [Software in the Public Interest (SPI)](https://www.spi-inc.org/)
+- [Open and Free Technology Community (OFTC)](https://www.oftc.net/) (member of SPI) ^4c4450
+  > The Open and Free Technology Community aims to provide stable and effective collaboration services to members of the community in any part of the world, while closely listening to their needs and desires.
+- [OW2](https://www.ow2.org)
+  > OW2 is an independent, global, open-source software community. We are not academics, we are not researchers, we are not lobbyists, we foster open source projects and we actually deliver software, and we claim to be the only such non-profit open source organisation of EU origin and DNA.
+- Open Source Hardware Association (OSHWA)
+- GitHub
+- [[WHO#OSPO|WHO OSPO]]
+- DPGA (Digital Public Goods Alliance)
+    - https://socialimpact.github.com/insights/what-are-digital-public-goods-and-DPGA/
+- [Open Source Initiative](https://opensource.org/osd/)
+
+
+## People
+
+- Bryce Adelstein Lelbach: C++, US standards committee for programming languages
+- Samuel Mbuthia: leads the WHO [[OSPO]]
+
+
+## Glossary
+
+Term/Acronym | Description
+-|-
+DPG | Digital Public Good
+
+
+## News
+
+- [Article ](https://www.theregister.com/2023/12/27/bruce_perens_post_open/) by (people:: [[Bruce Perensen]]) @TheRegister
+
+
+- https://opensource.guide/
+- [gnu.org: What is Free Software?](https://www.gnu.org/philosophy/free-sw.html)
+
+## References
+
+[first-os-contrib]: <https://github.com/readme/guides/first-oss-contribution>
\ No newline at end of file

ardc.md

+---
+title: Australia Research Data Commons
+aliases:
+  - ARDC
+visibility: public
+---
+# Australia Research Data Commons
+
+- collaborations with Netherlands [[eScienceCenter]]
+
+## Projects
+
+- [Research VDI based on OpenStack (YouTube)][openstack vdi yt]
+- [FAIR principles self-assesment tool for research software](https://fairsoftwarechecklist.net)
+
+## References
+
+[openstack vdi yt]: <https://www.youtube.com/watch?v=juczRNlfg6c>
+[publish research sw]: <https://ardc.edu.au/resource/publishing-research-software/>

eScienceCenter.md

+---
+title: EScienceCenter
+---
+- [Knowledge Base](https://www.esciencecenter.nl/knowledge-base/)
+    - [[Practical guide to Software Management Plans.pdf]] | [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.7248877.svg)](https://doi.org/10.5281/zenodo.7248877)
+- [Fllowship Program](https://www.esciencecenter.nl/fellowship-programme/)

openscience.md

+---
+title: Open Science
+aliases:
+  - Open Research
+  - Open Science
+visibility: public
+related:
+  - "[[resa|ReSA]]"
+  - "[[Research]]"
+---
+| Resources | References |
+| ---- | ---- |
+| See also | [[Research]] |
+| [Research Software Alliance](ReSA) | [ReSA Guidelines] |
+| [Research Data Alliance](RDA) |  |
+
+# Open Science
+
+## Organisations
+
+- [[eScienceCenter]]
+- [[ARDC]]
+- [[OSCG]]
+- [Public Spaces](https://publicspaces.net)
+- [PubHubs](https://pubhubs.net/index.html)
+    - [Video presentation @PublicSpaces](https://video.publicspaces.net/w/wzZ1H4iUNBkchwVKNyXBU6)
+- [[Turing Institute]]
+- [OW2](https://www.ow2.org): Open source community for professional software
+  involved in some EU projects
+    - [IT infrastructure](https://www.ow2.org/view/IT_Infrastructure/)
+    - [Software projects](https://projects.ow2.org/view/wiki/)
+    - [Open Science (projects)](https://www.ow2.org/view/openscience/)
+- OECD
+    - [Council Recommendation on Access to Research Data from Public Funding.](https://legalinstruments.oecd.org/en/instruments/OECD-LEGAL-0347)
+- UNESCO
+    - [Recommendation on Open Science](https://en.unesco.org/science-sustainable-future/open-science/recommendation)
+
+
+## Countries
+
+See also [ReSA Guidelines]: National and regional policies and strategies
+
+- France
+    - https://www.ouvrirlascience.fr/get-started-with-open-science/
+
+### Netherlands
+
+- [Article @Science Guide: “De universiteiten in Nederland zijn op de rug gaan liggen voor Big Tech”](https://www.scienceguide.nl/2023/05/de-universiteiten-in-nederland-zijn-op-de-rug-gaan-liggen-voor-big-tech/)
+
+20 July 2022: [Agreement on Reforming Research Assessment](file://journal/personal/science/2022_07_19_rra_agreement_final.pdf), I. Base [...] principles
+> Ensure independence and transparency of the data, infrastructure and criteria necessary for
+research assessment and for determining research impacts; in particular by clear and
+transparent data collection, algorithms and indicators, by ensuring control and ownership by
+the research community over critical infrastructures and tools, and by allowing those assessed
+to have access to the data, analyses and criteria used.
+
+How is this fulfilled/guaranteed in the case of Dutch universities, relying on external Software to track and evaluate scientific output.
+
+[^1]: <https://www.theguardian.com/science/political-science/2018/jun/29/elsevier-are-corrupting-open-science-in-europe>
+[^2]: <https://www.liquisearch.com/elsevier/criticism_and_controversies>
+[^3]: <https://www.theguardian.com/science/2012/feb/02/academics-boycott-publisher-elsevier>
+
+
+## Universities
+
+
+### RUG
+
+- [[personal/research/organisations/rug#Open Science|RUG: Open Science]]
+- [Website Open Science](https://www.rug.nl/research/openscience/)
+- [Program](https://www.rug.nl/research/openscience/ug-open-science-program/)
+- [Ambassadors](https://www.rug.nl/research/openscience/open-science-ambassadeurs)
+
+> [!info]- [[08-09-2022: Webinar Pure]]
+> RUG gibt  an sich für FAIR Prinzipien und Open Access einzusetzen. Andererseits baut man auf Software von Elsevier, die nicht unbedingt dafür bekannt sind, Offenheit und Zugänglichkeit in der Wissenschaft zu fördern.[^1][^2][^3] Viele Länder und Hochschulen boykottieren Elsevier. Niederländische Hochschulen haben dagegen mit dem Verlag verhandelt und sich Zugang zu Artikeln erkauft. Der Preis - man hat sich bereit erklärt für Elsevier Meta-Daten zu generieren. Dazu wird die Software Pure verwendet. An der Universität Groningen wird teilweise die Vergabe von Mitteln an den Aktivitäten (auf Pure) festgemacht. Ist dieses Vorgehen transparent? Was ist die zugrundeliegende Metrik?
+
+2023-08-31: [Blog post on high salaries of publishing CEOs](https://www.rug.nl/about-ug/policy-and-strategy/data-autonomy/blog/overpaid-bankers-think-again-scientific-publishers-top-the-charts)
+
+## People
+
+- <a href="https://www.rug.nl/staff/s.van.lanen/">S. (Sander) van Lanen | How to find us | Find a member of staff | University of Groningen</a>
+- Melanie Imming: [OrcID](https://orcid.org/0000-0003-2376-9755) | [website](https://www.immingimpact.eu/)
+      consultant, material on Open Science (presentations, brochures, ...)
+
+
+## Principles
+
+### FAIR
+
+- [Article FAIR software principles](https://doi.org/10.1038%2Fsdata.2016.18)
+- [FAIR Principles for Research Software ![](https://zenodo.org/badge/DOI/10.15497/RDA00068.svg)](https://doi.org/10.15497/RDA00068) 
+- [Nature article Introducing the FAIR Principles for research software](https://www.nature.com/articles/s41597-022-01710-x#ref-CR1)
+- [[ARDC]] [FAIR principles self-assesment tool for research software](https://fairsoftwarechecklist.net)
+
+## References
+
+- [The Turing Way](https://the-turing-way.netlify.app/index.html) | [![|20](github.png)](https://github.com/alan-turing-institute/the-turing-way) | [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.3233986.svg)](https://doi.org/10.5281/zenodo.3233986)
+- [RUG Open Science Blog: Good practices for FAIR data management - an interview with Robert Inklaar (Director GGDC) on achieving impact with open data](https://www.rug.nl/library/open-access/blog/good-practices-for-fair-data-management-an-interview-with-robert-inklaar-achieving-impact-with-ope) #science/openscience #data/management #science/data
+    - collaboration: [[EU_Horizon]] projects
+    - [DataverseNL](https://www.rug.nl/digital-competence-centre/research-data/archive-and-publish/dataversenl)
+    - [GGDC website](http://www.ggdc.net/)
+- declarations
+    - [Berlin declaration on Open Access](https://openaccess.mpg.de/Berlin-Declaration)
+    - [Budapest Open Access declaration](https://www.budapestopenaccessinitiative.org/)
+- [Policy Clause Bank and Policy Generator](https://www.orfg.org/news/2022/6/8/orfg-releases-new-resource-to-facilitate-funders-open-research-policies)
+
+[ReSA Guidelines]: <https://www.researchsoft.org/guidelines/>

ospo.md

+---
+title: Open Source Program Office (OSPO)
+acronym: OSPO
+visibility: public
+author: Sebastian Erfort
+---
+> [!info]- OSPO infographic
+> ![](ospo_infographic.pdf)
+
+## Organisations
+
+See also [[public/tech/OpenSource#Organisations|OpenSource: Organisations]]
+
+[OSPO Landscape](https://landscape.todogroup.org/) ![](https://landscape.todogroup.org/)
+
+- [[WHO#OSPO]]
+- [[GitHub]]
+- [[CERN]]
+- [TODO Group](https://todogroup.org/) | [GitHub](https://github.com/todogroup)
+    - [OSPO Landscape](https://landscape.todogroup.org/): overview of organisations with an OSPO and related tools
+    - [OSPO Definition](https://github.com/todogroup/ospodefinition.org)
+- [OSPOCO](https://ospo.co/): providing professional help around OSPOs as a service |  [Blog](https://ospo.co/blog/)
+    - [Key parts of an OSPO](https://ospo.co/all-about-ospos/key-parts-of-an-ospo/)
+ 
+ 
+## People
+
+- Christine Abernathy, F5,  OSPO director
+- [[Samuel Mbuthia]]: leads the WHO [[OSPO]]
+- Ashley Wolf, GitHub, Open Source Director
+
+## Events
+
+- [[2023-11-28]]: [CERN OSPO Inaugural Event](https://indico.cern.ch/event/1327562/timetable/?view=standard)
+      Presentations: NVIDIA, OSHWA, WHO OSPO
+- [Linux Foundation: TODO Group, OSPOlogy](https://community.linuxfoundation.org/todo-group-ospology/)
+- [OSPOlogy meetings](https://github.com/todogroup/ospology/tree/main/meetings#ospology-planning)
+
+
+## Resources
+
+- [TODO Group OSPO guides](https://todogroup.org/resources/guides/)
+![[OpenSource#^1a1526]]
+
+
+## References
+
+- organisations
+    - [OSPO++](https://ospoplusplus.org/): (US) network and a community of collaborative open source program offices in universities, governments, and civic institutions
+    - [TODO group](https://todogroup.org/): extensive resources, mostly industry members
+        - [Mindmap](https://ospomindmap.todogroup.org/): roles, ...
+        - [OSPO definition @GH](https://github.com/todogroup/ospodefinition.org)
+        - [OSPOlogy @GH](https://github.com/todogroup/ospology): 📖 OSPOlogy - The Study of OSPOs
+        - [Training](https://todogroup.org/resources/training/)
+        - [Guides and resources](https://todogroup.org/resources/guides/)
+    - [OSPO Alliance](https://ospo-alliance.org/)
+        - [presentation Establishing OSPO Metrics](https://ospo-alliance.org/resources/onramp_20220318/20220318_OSPO_OnRamp_Establishing_metrics_OSPO_first_steps.pdf)
+    - Linux foundation
+        - [A Deep Dive into Open Source Program Offices: Structure, Roles, Responsibilities, and Challenges](https://www.linuxfoundation.org/research/a-deep-dive-into-open-source-program-offices)
+    - GitHub
+        - [OSPO community @GitHub](https://github.com/community/OSPO)
+        - [github-ospo](github.com/github/github-ospo): Helping open source program offices get started
+             - [Blog post](https://github.blog/2023-03-13-an-open-source-project-to-empower-ospos-everywhere/)
+- [RedHat article: guide to setting up your OSPO](https://opensource.com/article/20/5/open-source-program-office)
+- [awesome-ospo @GH](https://github.com/todogroup/awesome-ospo)
+- GitHub
+    - [Topic: OSPO](https://github.com/topics/ospo)
+    - [The ReadME Project](https://github.com/readme) #check/tech/open-source
\ No newline at end of file

rda.md

+---
+title: Research Data Alliance
+aliases:
+  - RDA
+url: http://www.rd-alliance.org/
+---
+
+# Research Data Alliance
+
+[Website](http://www.rd-alliance.org/)

resa.md

+---
+title: Research Software Alliance
+acronym: ReSA
+aliases:
+  - ReSA
+type: organisation
+category:
+  - research/software
+url: https://www.researchsoft.org
+desc-short: The vision of the Research Software Alliance (ReSA) is that research software and those who develop and maintain it are recognised and valued as fundamental and vital to research worldwide.
+---
+# Research Software Alliance
+
+- [ReSA Outputs](https://www.researchsoft.org/resa-resources/) (Resources) ^f9ba39
+- [ReSA Guidelines](https://www.researchsoft.org/guidelines/)
+    - [Foundational Competencies and Responsibilities of a Research Software Engineer](http://arxiv.org/abs/2311.11457)
+- [Research Software Funding Opportunities](https://www.researchsoft.org/funding-opportunities/)
+- [ADORE.software](https://adore.software/) 
+    - [Toolkit](https://adore.software/toolkit/)
+      > The ADORE.software Toolkit aims to support implementation of the Amsterdam Declaration on Funding Research Software Sustainability. It provides examples of funder programs, policies, and resources for each of the Declaration’s recommendations in the four areas of research software practice, research software ecosystem, research software personnel, and research software ethics. The Toolkit is a living resource – it will be updated regularly to incorporate new information.
+
+
+## References
+
+[ReSA Guidelines]: <https://www.researchsoft.org/guidelines/>
\ No newline at end of file

rug.md

+---
+title: Rug
+---
+## News
+
+- Staff welfare team: consultation for managers, 050-3635551, pilot project until end of 2022, prolonged in 2023 if successful
+
+## University Websites
+
+[Edit staff profile](https://myuniversity.rug.nl/infonet/medewerkers/ict/servicedesk/handleiding/handleiding-mepa/profielpagina-bewerken) | [My profile](https://myuniversity.rug.nl/infonet/medewerkers/profiles/s.erfort/) | [Tutorials](https://myuniversity.rug.nl/infonet/medewerkers/ict/kennisbank/werken-aan-het-web/how-to/werken-met-apollo/profielpagina-editor/)
+
+[Mailing Lists](http://list.rug.nl/)
+
+[Language courses for staff memers](https://www.rug.nl/language-centre/language-courses/dutch/general-skills/a2-b1-ug-staff) | [67% discount on language courses](https://www.rug.nl/language-centre/language-courses/dutch/general-skills/tmmt) | [RUG Language Buddy](https://myuniversity.rug.nl/infonet/medewerkers/actueel/news/rug-language-buddy-one-of-your-colleagues-could-now-become-your-language-partner)
+
+[SURF: Mastodon](https://www.surf.nl/en/getting-started-with-mastodon-tutorials) #tech/social/mastodon #tech/social
+
+Apollo Content Management System
+
+- <https://myuniversity.rug.nl/infonet/medewerkers/ict/werken-aan-het-web/how-to/werken-met-apollo/>
+- <https://myuniversity.rug.nl/infonet/medewerkers/ict/werken-aan-het-web/how-to/werken-met-apollo/apollo-content-manager/>
+- <https://myuniversity.rug.nl/infonet/medewerkers/intracom/nieuws/nieuws-voor-webredacteuren-release-ursinia>
+
+## Departments and Research Groups
+
+### [[CIT]]
+
+### Faculty of Science and Engineering (FSE)
+
+[Science Linx](https://www.rug.nl/sciencelinx/)
+> Science LinX is the science center of the Faculty of Science and Engineering of the University of Groningen.
+> We connect the science produced at our Faculty with the general public, schools and societal partners
+
+#### Discrete Technologies & Process Automisation (DTPA)
+
+<https://www.rug.nl/research/discrete-technology-production-automation/?lang=en>
+[[Busman_Simon|Simon Busman]]
+
+
+### Software Engineering and Architecture (SEARCH)
+
+Tags: #research/software
+
+[SEARCH website](https://search-rug.github.io/)
+
+
+## People
+
+- [Prof. Andrea Capiluppi](https://www.rug.nl/staff/a.capiluppi/?lang=en): associate professor in software engineering ^[[DCC Interview Capiluppi](https://www.rug.nl/digital-competence-centre/contact/news/2023/interview-andrea-capiluppi-tdcc-nes-07-12-2023)]
+    - going to represent the UG Natural and Engineering Sciences (NES) community within the TDCC-NES [governance board](https://tdcc.nl/about-tddc/nes/governance/)
+    - research advocates the potential of open-source over proprietary software by delving into its sustainability and maintenance
+
+[DCC Interview Capiluppi]: <https://www.rug.nl/digital-competence-centre/contact/news/2023/interview-andrea-capiluppi-tdcc-nes-07-12-2023>
+## Teaching
+
+Teaching Academy Groningen (TAG)
+
+- [Communities of Practice (CoPs)](https://www.rug.nl/about-ug/organization/service-departments/teaching-academy-groningen/communities-of-practice/new-main-cop-page):
+    - [Interdisciplinary Education](https://www.rug.nl/about-ug/organization/service-departments/teaching-academy-groningen/communities-of-practice/community-of-practice-interdisciplinaryeducation)
+    - [Blended Learning](https://www.rug.nl/about-ug/organization/service-departments/teaching-academy-groningen/communities-of-practice/community-of-practice-blended-learning)
+    - [Inclusion & Diversity](https://www.rug.nl/about-ug/organization/service-departments/teaching-academy-groningen/communities-of-practice/community-of-practice-inclusion-diversity)
+    - [Teaching Innovation in STEM Education](https://www.rug.nl/about-ug/organization/service-departments/teaching-academy-groningen/communities-of-practice/new-innovation-in-stem)
+    - [Wellbeing](https://www.rug.nl/about-ug/organization/service-departments/teaching-academy-groningen/communities-of-practice/new-wellbeing)
+    - [Research into Higher Education](https://www.rug.nl/about-ug/organization/service-departments/teaching-academy-groningen/communities-of-practice/research-into-higher-education)
+- [University Website](https://www.rug.nl/about-ug/organization/service-departments/teaching-academy-groningen/)
+- [Annual report 2021 - 2022](https://www.canva.com/design/DAFHbScRS6o/dEIHqPiwFOPITSKSJ9RlLg/view?utm_content=DAFHbScRS6o&utm_campaign=designshare&utm_medium=link&utm_source=homepage_design_menu#1)
+- <https://myuniversity.rug.nl/infonet/medewerkers/actueel/news/from-the-board-of-the-university-tag-annual-report-warmly-welcomes-all-lecturers>
+- Erasmus + [Start](https://supportingstart.eu/) project: developing a toolkit for academics on how to teach first-year students to become aware of (1) the challenges that students are facing during their transition to higher education, and (2) how much academics can contribute to making student transition smoother and making higher education more inclusive
+
+[Massive Open Online Courses (MOOCs)](https://www.rug.nl/society-business/knowledge-and-learning/mooc/) ^ed4a02
+
+## Open Science
+
+- [Website](https://www.rug.nl/research/openscience/)
+    - [Podcast: Open Science Bites]
+- [UG Open Science Programme](https://www.rug.nl/research/openscience/ug-open-science-program/?lang=en)
+- [Data Autonomy](https://www.rug.nl/about-ug/policy-and-strategy/data-autonomy/)
+- [[OSCG|Open Science Community Groningen (OSCG)]]
+- [Blog post Data Autonomy and Open Source](https://www.rug.nl/about-ug/policy-and-strategy/data-autonomy/blog/data-autonomy-and-open-source-a-match-for-transparency) by [[../staff/Vos_Daniel|Daniel Vos]]
+
+[[CIT#Open Science|My notes on CIT: Open Science]]
+
+[[openscience|My notes on Open Science]]
+
+- [[openscience#Netherlands|Netherlands]]

tdcc.md

+---
+title: Thematic Digital Competence Centre (TDCC)
+acronym: TDCC
+related:
+  - "[[DCC]]"
+url: https://tdcc.nl/
+tags:
+  - research/it
+---
+[Website](https://tdcc.nl/)
+
+# Thematic Digital Competence Centre
+
+- network based initiatives set up by NWO and the Dutch academic community to broker investments into open science projects
+- three TDCCs are national and discipline based, with one pillar each for the Social Sciences & Humanities (SSH), Natural and Engineering Sciences (NES) and Life Sciences & Health (LSH).
+    - [ ] [Roadmap TDCC-NES](https://www.rug.nl/digital-competence-centre/contact/news/2023/interview-andrea-capiluppi-tdcc-nes-07-12-2023) #check/research/it
+- [first projects](https://tdcc.nl/two-tdcc-nes-bottleneck-projects-granted-funding/) from the previous call were already awarded by the NWO and the [UG DCC is leading one](https://www.rug.nl/digital-competence-centre/contact/news/2023/dcc-receives-nwo-grants-to-enhance-services-11-2023)
+- RUG NES: [[Capiluppi]]
\ No newline at end of file